MaveDB documentation

MaveDB is a biological database for Multiplex Assays of Variant Effect (MAVE) datasets, such as those generated by Deep Mutational Scanning (DMS) or Massively Parallel Reporter Assays (MPRA).

Source code is available from the MaveDB GitHub under the AGPLv3 license. To report issues or request new features, please use the MaveDB issue tracker.

• User account management
  • Setting an email address
  • API access tokens
• Depositing your data into MaveDB
  • Metadata formatting
  • Data formatting
  • Required information checklist
• Making your data public
  • Deprecating score sets
• Record types
  • Experiment sets
  • Experiments
  • Score sets
• Data table formats
  • Variant columns
  • Score table columns
  • Count table columns
• Target sequence information
• MaveDB accession numbers
  • Meta-analysis accession numbers
  • Temporary accession numbers
• Contributor roles
• Data licensing
• Citing MaveDB